Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SWX5_LOXAFUncharacterized protein. (989 aa)    
Predicted Functional Partners:
SINHCAF
SIN3-HDAC complex associated factor.
    
 
 0.797
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.572
AK9
Uncharacterized protein.
    
 0.562
G3TCK5_LOXAF
Uncharacterized protein.
    
 0.562
SIN3B
SIN3 transcription regulator family member B.
   
 0.561
SIN3A
SIN3 transcription regulator family member A.
   
 0.561
HDGFL2
HDGF like 2.
    
 0.522
DNPEP
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
    
 
 0.510
MRPL15
Mitochondrial ribosomal protein L15.
    
 
 0.438
RANBP2
RAN binding protein 2.
    
 0.435
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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