STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFC3H1Zinc finger C3H1-type containing. (1986 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
    
 0.969
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.823
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.820
PNISR
PNN interacting serine and arginine rich protein.
   
    0.706
WDR74
WD repeat domain 74.
     
 0.673
EXOSC4
Exosome component 4.
    
 0.671
RBM26
RNA binding motif protein 26.
   
 
 0.652
RBM27
Uncharacterized protein.
   
 
 0.646
SKIV2L
Ski2 like RNA helicase.
    
 
 0.642
SRRT
Serrate, RNA effector molecule.
    
 
 0.626
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.