STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF6DDB1 and CUL4 associated factor 6. (676 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.958
DDB2
Damage specific DNA binding protein 2.
    
 0.865
G3T1T4_LOXAF
WD_REPEATS_REGION domain-containing protein.
     
 0.846
DCAF5
DDB1 and CUL4 associated factor 5.
   
 
 0.842
DCAF12
DDB1 and CUL4 associated factor 12.
     
 0.768
CUL4B
Cullin 4B; Belongs to the cullin family.
   
 0.759
CUL4A
Cullin 4A; Belongs to the cullin family.
   
 0.759
DDA1
DET1 and DDB1 associated 1.
    
 0.739
DCAF10
DDB1 and CUL4 associated factor 10.
     
 0.732
RBX1
Ring-box 1.
    
 0.722
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.