STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF1PHD finger protein 1. (571 aa)    
Predicted Functional Partners:
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.952
JARID2
Jumonji and AT-rich interaction domain containing 2.
    
 0.915
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.911
EED
Embryonic ectoderm development.
   
 0.857
EPOP
Elongin BC and polycomb repressive complex 2 associated protein.
    
 0.848
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.830
AEBP2
AE binding protein 2.
    
 0.825
MTF2
Metal response element binding transcription factor 2.
  
 
0.814
PHF19
PHD finger protein 19.
  
 
0.797
INTS1
Integrator complex subunit 1.
    
 0.796
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.