STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTX1Metaxin. (443 aa)    
Predicted Functional Partners:
MTX2
Metaxin 2.
   
0.984
SAMM50
SAMM50 sorting and assembly machinery component.
   
 0.937
MTX3
Metaxin 3.
  
  
 
0.887
TOMM22
Translocase of outer mitochondrial membrane 22.
    
 0.838
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.832
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.815
TOMM40
Translocase of outer mitochondrial membrane 40.
   
 0.798
TOMM20L
Translocase of outer mitochondrial membrane 20 like.
    
 0.793
TOMM20
Translocase of outer mitochondrial membrane 20.
    
 0.793
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
    
 0.745
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.