STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUTACutA divalent cation tolerance homolog. (177 aa)    
Predicted Functional Partners:
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
    
   0.763
PHF1
PHD finger protein 1.
      
 0.741
PRKAA1
Non-specific serine/threonine protein kinase.
    
   0.702
WASHC4
WASH complex subunit 4.
      
 0.672
GABRB1
Gamma-aminobutyric acid type A receptor beta1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.628
PRKAG1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
  
   0.589
PRKAG2
Protein kinase AMP-activated non-catalytic subunit gamma 2.
  
   0.589
SYNGAP1
Synaptic Ras GTPase activating protein 1.
      
 0.563
CUTC
CutC copper transporter.
      
 0.522
G3T0P7_LOXAF
Uncharacterized protein.
      
 0.506
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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