STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC77Coiled-coil domain containing 77. (491 aa)    
Predicted Functional Partners:
LETM1
Leucine zipper and EF-hand containing transmembrane protein 1.
    
   0.767
C18orf54
Chromosome 18 open reading frame 54.
      
 0.763
NEMP1
Nuclear envelope integral membrane protein 1.
   
  
 0.748
CCDC150
Coiled-coil domain containing 150.
   
  
 0.747
RIBC2
RIB43A domain with coiled-coils 2.
      
 0.737
DEPDC1B
DEP domain containing 1B.
   
 
 0.721
ZNF367
Zinc finger protein 367.
      
 0.695
GSTCD
Glutathione S-transferase C-terminal domain containing.
      
 0.692
G3TD28_LOXAF
Uncharacterized protein.
   
 
 0.679
CCDC14
Uncharacterized protein.
   
 
 0.679
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.