STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC77Coiled-coil domain containing 77. (491 aa)    
Predicted Functional Partners:
NEMP1
Nuclear envelope integral membrane protein 1.
   
  
 0.608
CCDC150
Coiled-coil domain containing 150.
   
  
 0.592
DEPDC1B
DEP domain containing 1B.
   
 
 0.583
C18orf54
Chromosome 18 open reading frame 54.
      
 0.582
C3orf14
Chromosome 3 open reading frame 14.
      
 0.574
RIBC2
RIB43A domain with coiled-coils 2.
      
 0.564
GSTCD
Glutathione S-transferase C-terminal domain containing.
      
 0.564
CCDC34
Uncharacterized protein.
   
  
 0.556
CEP85
Centrosomal protein 85.
      
 0.526
ZNF367
Zinc finger protein 367.
      
 0.518
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.