STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTNADystrobrevin. (743 aa)    
Predicted Functional Partners:
SNTA1
Syntrophin alpha 1.
   
 0.957
SNTB2
PH domain-containing protein.
   
 0.954
SNTB1
PDZ domain-containing protein.
   
 0.951
NOS1
Nitric oxide synthase 1.
    
 0.855
DAG1
Dystroglycan 1.
    
 0.780
SNTG2
Syntrophin gamma 2.
    
 0.762
SNTG1
Syntrophin gamma 1.
    
 0.762
SSPN
Sarcospan.
    
 0.739
RSPH3
Radial spoke head 3.
    
   0.698
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
    
   0.698
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.