STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPKOWG-patch domain and KOW motifs. (484 aa)    
Predicted Functional Partners:
DHX16
DEAH-box helicase 16.
   
 0.992
DHX38
DEAH-box helicase 38.
   
 0.964
RBM10
RNA binding motif protein 10.
   
 
 0.933
BUD13
BUD13 homolog.
   
 
 0.909
CWC27
CWC27 spliceosome associated cyclophilin.
    
 0.869
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.856
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.851
RNF113A
Ring finger protein 113A.
   
  0.836
PPIL2
Peptidylprolyl isomerase like 2.
    
 0.827
ARMC7
Uncharacterized protein.
   
   0.808
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.