STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBP4WW domain binding protein 4. (369 aa)    
Predicted Functional Partners:
PRPF31
Pre-mRNA processing factor 31.
    
 0.946
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.923
ZMAT2
Zinc finger matrin-type 2.
   
 0.920
PRPF38A
Pre-mRNA processing factor 38A.
   
 0.916
MFAP1
Microfibril associated protein 1.
   
 0.914
PRPF6
Pre-mRNA processing factor 6.
    
 0.901
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.893
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.893
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.892
IK
IK cytokine.
   
  0.874
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.