STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT10Synaptotagmin 10. (522 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
     
 0.584
G3U095_LOXAF
Uncharacterized protein.
     
 0.584
VPS53
VPS53 subunit of GARP complex.
   
  
 0.579
RPH3AL
Rabphilin 3A like (without C2 domains).
 
 
 
 0.568
AFAP1L1
Actin filament associated protein 1 like 1.
      
 0.557
TDRD5
Tudor domain containing 5.
      
 0.537
SYT6
Synaptotagmin 6.
  
 
  
0.511
SYT3
Synaptotagmin 3.
    
  
0.505
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.491
G3UF18_LOXAF
C2 domain-containing protein.
     
 0.491
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.