Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCAR3BCAR3 adaptor protein, NSP family member. (824 aa)    
Predicted Functional Partners:
BCAR1
BCAR1 scaffold protein, Cas family member.
    
 0.952
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 0.847
GAST
Gastrin.
    
   0.778
KCNE4
Uncharacterized protein.
     
 0.747
TULP4
TUB like protein 4.
     
 0.655
TNS3
Tensin 3.
    
 0.540
KRT77
Keratin 77; Belongs to the intermediate filament family.
    
 0.536
TULP1
Tubby-like protein; Belongs to the TUB family.
    
 
 0.528
TUB
Tubby-like protein; Belongs to the TUB family.
    
 
 0.528
RHOV
Ras homolog family member V.
   
 0.517
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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