Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BPIFB1 | COL3A1 | ENSLAFP00000008599 | ENSLAFP00000013828 | BPI fold containing family B member 1. | Collagen type III alpha 1 chain. | 0.584 |
BPIFB1 | TMEM19 | ENSLAFP00000008599 | ENSLAFP00000004980 | BPI fold containing family B member 1. | Transmembrane protein 19. | 0.523 |
BPIFB1 | TTR | ENSLAFP00000008599 | ENSLAFP00000012408 | BPI fold containing family B member 1. | Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. | 0.600 |
COL3A1 | BPIFB1 | ENSLAFP00000013828 | ENSLAFP00000008599 | Collagen type III alpha 1 chain. | BPI fold containing family B member 1. | 0.584 |
COL3A1 | NTN5 | ENSLAFP00000013828 | ENSLAFP00000001628 | Collagen type III alpha 1 chain. | Netrin 5. | 0.584 |
COL3A1 | SCARF1 | ENSLAFP00000013828 | ENSLAFP00000012962 | Collagen type III alpha 1 chain. | Scavenger receptor class F member 1. | 0.647 |
COL3A1 | SLC30A5 | ENSLAFP00000013828 | ENSLAFP00000007846 | Collagen type III alpha 1 chain. | Solute carrier family 30 member 5. | 0.640 |
COL3A1 | TMEM19 | ENSLAFP00000013828 | ENSLAFP00000004980 | Collagen type III alpha 1 chain. | Transmembrane protein 19. | 0.636 |
COL3A1 | TMEM216 | ENSLAFP00000013828 | ENSLAFP00000009633 | Collagen type III alpha 1 chain. | Transmembrane protein 216. | 0.589 |
COL3A1 | TTR | ENSLAFP00000013828 | ENSLAFP00000012408 | Collagen type III alpha 1 chain. | Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. | 0.641 |
HPRT1 | TMEM19 | ENSLAFP00000023524 | ENSLAFP00000004980 | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Transmembrane protein 19. | 0.550 |
LIPN | RUNDC3A | ENSLAFP00000000793 | ENSLAFP00000024553 | Lipase; Belongs to the AB hydrolase superfamily. Lipase family. | RUN domain containing 3A. | 0.578 |
LIPN | TMEM19 | ENSLAFP00000000793 | ENSLAFP00000004980 | Lipase; Belongs to the AB hydrolase superfamily. Lipase family. | Transmembrane protein 19. | 0.576 |
NTN5 | COL3A1 | ENSLAFP00000001628 | ENSLAFP00000013828 | Netrin 5. | Collagen type III alpha 1 chain. | 0.584 |
NTN5 | TMEM19 | ENSLAFP00000001628 | ENSLAFP00000004980 | Netrin 5. | Transmembrane protein 19. | 0.579 |
NTN5 | TTR | ENSLAFP00000001628 | ENSLAFP00000012408 | Netrin 5. | Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. | 0.600 |
RUNDC3A | LIPN | ENSLAFP00000024553 | ENSLAFP00000000793 | RUN domain containing 3A. | Lipase; Belongs to the AB hydrolase superfamily. Lipase family. | 0.578 |
RUNDC3A | TMEM19 | ENSLAFP00000024553 | ENSLAFP00000004980 | RUN domain containing 3A. | Transmembrane protein 19. | 0.583 |
SCARF1 | COL3A1 | ENSLAFP00000012962 | ENSLAFP00000013828 | Scavenger receptor class F member 1. | Collagen type III alpha 1 chain. | 0.647 |
SCARF1 | TMEM19 | ENSLAFP00000012962 | ENSLAFP00000004980 | Scavenger receptor class F member 1. | Transmembrane protein 19. | 0.577 |
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