STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX10RNA helicase. (873 aa)    
Predicted Functional Partners:
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
 
 0.994
DDX18
RNA helicase.
  
  
0.985
NOM1
Nucleolar protein with MIF4G domain 1.
   
 
 0.974
ABT1
Activator of basal transcription 1.
   
 
 0.973
UTP3
UTP3 small subunit processome component.
   
 0.971
UTP14A
Uncharacterized protein.
   
 0.967
G3U6D5_LOXAF
Uncharacterized protein.
   
 0.967
NOL6
Nucleolar protein 6.
   
 0.963
RRP36
Ribosomal RNA processing 36.
   
 0.960
NOP14
NOP14 nucleolar protein.
   
 0.959
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.