STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX10RNA helicase. (873 aa)    
Predicted Functional Partners:
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
 
 0.983
AATF
Apoptosis antagonizing transcription factor.
   
 
 0.974
HEATR1
U3snoRNP10 domain-containing protein.
   
 0.973
NOL10
Nucleolar protein 10.
   
 
 0.967
WDR43
WD repeat domain 43.
   
 0.963
BYSL
Bystin like.
   
 
 0.963
DDX18
RNA helicase.
   
 
 0.959
NOP14
NOP14 nucleolar protein.
   
 0.950
NOP58
NOP58 ribonucleoprotein.
  
 
 0.944
NOM1
Nucleolar protein with MIF4G domain 1.
   
 
 0.939
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.