STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN13Tetraspanin 13; Belongs to the tetraspanin (TM4SF) family. (204 aa)    
Predicted Functional Partners:
ANKMY2
Ankyrin repeat and MYND domain containing 2.
      
 0.528
CCNB1IP1
Cyclin B1 interacting protein 1.
      
 0.521
TSPAN17
Tetraspanin.
      
 0.517
SLC30A5
Solute carrier family 30 member 5.
      
 0.499
SNX13
Sorting nexin 13.
    
 
 0.466
TSPAN6
Tetraspanin.
   
  
 0.466
PHF20L1
PHD finger protein 20 like 1.
     
 0.461
TMEM41B
Transmembrane protein 41B.
      
 0.447
ZNF830
Zinc finger protein 830.
      
 0.447
C3orf14
Chromosome 3 open reading frame 14.
      
 0.421
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.