STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEX264Testis expressed 264, ER-phagy receptor. (312 aa)    
Predicted Functional Partners:
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.518
CALCOCO1
Calcium binding and coiled-coil domain 1.
      
 0.481
ATL3
Atlastin GTPase 3.
      
 0.459
CATSPER2
Cation channel sperm associated 2.
      
 0.448
NBR1
NBR1 autophagy cargo receptor.
      
 0.446
SPAG5
Sperm associated antigen 5.
    
 
 0.422
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.