STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMDEmerin. (242 aa)    
Predicted Functional Partners:
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
 0.984
BANF1
Barrier to autointegration factor 1.
    
 0.983
BANF2
Barrier to autointegration factor 2.
    
 0.932
SUN1
Sad1 and UNC84 domain containing 1.
    
 
 0.912
SUN2
Sad1 and UNC84 domain containing 2.
    
 
 0.890
LMO7
LIM domain 7.
    
 
 0.846
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 
 0.831
LEMD3
LEM domain containing 3.
     
 0.823
LBR
Lamin B receptor.
     
 0.787
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.770
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.