Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EMDEmerin. (242 aa)    
Predicted Functional Partners:
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
 0.993
BANF1
Barrier to autointegration factor 1.
    
 0.991
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
 
 0.913
BANF2
Barrier to autointegration factor 2.
    
 0.886
SYNE2
KASH domain-containing protein.
    
 
 0.879
SUN1
Sad1 and UNC84 domain containing 1.
    
 
 0.861
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.849
LEMD3
LEM domain containing 3.
     
 0.838
SUN2
Sad1 and UNC84 domain containing 2.
    
 
 0.836
LBR
Lamin B receptor.
     
 0.824
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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