STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100658583Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
CUL2
Cullin 2; Belongs to the cullin family.
    
 
 0.855
ELOB
Elongin B.
    
   0.785
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
   0.778
PIR
Pirin; Belongs to the pirin family.
     
 0.686
SLC25A24
Solute carrier family 25 member 24; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.597
ERC1
ELKS/RAB6-interacting/CAST family member 1.
      
 0.588
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
      
 0.567
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
      
 0.552
RBX1
Ring-box 1.
    
   0.540
OIP5
Opa interacting protein 5.
      
 0.533
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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