STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100658583Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
CUL2
Cullin 2; Belongs to the cullin family.
    
 
 0.579
ERC1
ELKS/RAB6-interacting/CAST family member 1.
    
 
 0.519
PPP1R15A
Protein phosphatase 1 regulatory subunit 15A.
  
   
 0.493
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
  
 0.460
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
      
 0.448
ZNF280B
Zinc finger protein 280B.
      
 0.444
TEX15
Testis expressed 15, meiosis and synapsis associated.
  
   
 0.412
G3TEM7_LOXAF
Uncharacterized protein.
  
     0.405
YDJC
YdjC chitooligosaccharide deacetylase homolog.
  
 
 0.405
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.