STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf42Chromosome 11 open reading frame 42. (334 aa)    
Predicted Functional Partners:
FAM71F1
Family with sequence similarity 71 member F1.
  
     0.459
LRRC36
Leucine rich repeat containing 36.
  
     0.450
DKKL1
Dickkopf like acrosomal protein 1.
  
     0.450
ODF1
Outer dense fiber of sperm tails 1.
  
     0.442
TNF
Tumor necrosis factor; Belongs to the tumor necrosis factor family.
  
     0.422
IL22RA1
Interleukin 22 receptor subunit alpha 1.
  
     0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.