Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUNH9orf3Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
DNM3
Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.567
SUN2
Sad1 and UNC84 domain containing 2.
    
 
 0.533
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
  
 0.518
G3T530_LOXAF
FAM194 domain-containing protein.
     
 0.517
TOX3
TOX high mobility group box family member 3.
      
 0.511
SUOX
Sulfite oxidase.
      
 0.508
NEIL2
Nei like DNA glycosylase 2.
      
 0.507
DENND1A
Uncharacterized protein.
      
 0.506
CCDC141
Coiled-coil domain containing 141.
    
 
 0.498
SPPL2A
Signal peptide peptidase like 2A.
      
 0.485
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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