STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3SXC4_LOXAFEGF-like domain-containing protein. (184 aa)    
Predicted Functional Partners:
RRP7A
Ribosomal RNA processing 7 homolog A.
    
 
 0.713
SMPD4
Sphingomyelin phosphodiesterase 4.
      
 0.711
FOXH1
Forkhead box H1.
   
 0.665
NODAL
Nodal growth differentiation factor.
    
 0.634
DDX11
DEAD/H-box helicase 11.
    
 
 0.633
FMNL1
Formin like 1.
    
 0.546
G3TCY7_LOXAF
Uncharacterized protein.
      
 0.545
G3U8H1_LOXAF
Uncharacterized protein.
      
 0.545
GDF3
Growth differentiation factor 3.
    
 0.543
G3UCX6_LOXAF
TGF_BETA_2 domain-containing protein.
    
 0.543
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.