STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBATAThymus, brain and testes associated. (355 aa)    
Predicted Functional Partners:
NCLN
Nicalin.
      
 0.710
DENND3
DENN domain containing 3.
      
 0.575
PAXBP1
PAX3 and PAX7 binding protein 1.
      
 0.566
SLC46A2
Solute carrier family 46 member 2.
      
 0.546
CCDC114
Coiled-coil domain containing 114.
      
 0.499
TMEM50B
Transmembrane protein 50B.
      
 0.497
DOP1B
DOP1 leucine zipper like protein B.
      
 0.459
GLIPR2
GLI pathogenesis related 2; Belongs to the CRISP family.
      
 0.459
SLAIN2
SLAIN motif family member 2.
      
 0.458
SPA17
Sperm surface protein Sp17; Sperm surface zona pellucida binding protein. Helps to bind spermatozoa to the zona pellucida with high affinity. Might function in binding zona pellucida and carbohydrates.
      
 0.423
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.