STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDTC1WD and tetratricopeptide repeats 1. (677 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.987
DCAF10
DDB1 and CUL4 associated factor 10.
   
 
 0.921
CUL4B
Cullin 4B; Belongs to the cullin family.
    
 0.918
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 0.918
DCAF5
DDB1 and CUL4 associated factor 5.
     
0.896
DDB2
Damage specific DNA binding protein 2.
     
 0.873
G3T1T4_LOXAF
WD_REPEATS_REGION domain-containing protein.
     
 0.865
DCAF13
DDB1 and CUL4 associated factor 13.
     
 0.853
DDA1
DET1 and DDB1 associated 1.
    
 0.850
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
     
 0.840
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.