STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA13Uncharacterized protein. (652 aa)    
Predicted Functional Partners:
APC
APC regulator of WNT signaling pathway.
   
 0.973
APC2
APC regulator of WNT signaling pathway 2.
   
 0.946
CDC42
Uncharacterized protein.
    
 0.909
ARHGEF4
Rho guanine nucleotide exchange factor 4.
    
  0.880
RAC2
Rac family small GTPase 2.
    
 0.864
RAC1
Rac family small GTPase 1.
    
 0.864
YWHAE
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon; Belongs to the 14-3-3 family.
    
   0.808
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.601
NASP
Nuclear autoantigenic sperm protein.
      
 0.560
ZBTB49
Zinc finger and BTB domain containing 49.
    
 
 0.549
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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