STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA13Uncharacterized protein. (652 aa)    
Predicted Functional Partners:
RAC2
Rac family small GTPase 2.
    
 0.949
APC
APC regulator of WNT signaling pathway.
   
 0.943
ARHGEF4
Rho guanine nucleotide exchange factor 4.
  
 
 
0.907
CDC42
Uncharacterized protein.
    
 0.747
NASP
Nuclear autoantigenic sperm protein.
      
 0.522
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.521
RAC1
Rac family small GTPase 1.
    
 0.516
ITSN2
Intersectin 2.
    
0.497
G3U095_LOXAF
Uncharacterized protein.
    
0.497
ITSN1
Intersectin 1.
    
0.483
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.