STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBTPS1Membrane bound transcription factor peptidase, site 1. (1057 aa)    
Predicted Functional Partners:
ATF6
Activating transcription factor 6.
     
 0.820
G3T5R7_LOXAF
BZIP domain-containing protein.
   
 
 0.774
MBTPS2
Membrane bound transcription factor peptidase, site 2.
   
  
 0.729
SCAP
SREBF chaperone.
   
 
 0.727
ATF6B
Activating transcription factor 6 beta.
     
 0.721
CREB3
cAMP responsive element binding protein 3.
   
 
 0.711
SREBF2
Sterol regulatory element binding transcription factor 2.
     
 0.695
SREBF1
Sterol regulatory element binding transcription factor 1.
     
 0.657
C12orf49
Chromosome 12 open reading frame 49.
    
 
 0.592
CREB3L1
cAMP responsive element binding protein 3 like 1.
   
 
 0.561
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.