STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MESTMesoderm specific transcript. (335 aa)    
Predicted Functional Partners:
GRB10
Growth factor receptor bound protein 10.
      
 0.703
CEP41
Centrosomal protein 41.
      
 0.651
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.631
DRAM1
DNA damage regulated autophagy modulator 1.
      
 0.623
SNRPN
Small nuclear ribonucleoprotein-associated protein.
      
 0.583
RFWD3
Ring finger and WD repeat domain 3.
      
 0.557
LRAT
Lecithin retinol acyltransferase.
      
 0.546
G3TIJ9_LOXAF
Uncharacterized protein.
      
 0.531
SGCE
Sarcoglycan epsilon.
      
 0.529
FLVCR1
Feline leukemia virus subgroup C cellular receptor 1.
   
  
 0.514
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.