STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAPD5Uncharacterized protein. (500 aa)    
Predicted Functional Partners:
TENT4A
Terminal nucleotidyltransferase 4A.
  
 
0.949
ZCCHC7
Uncharacterized protein.
   
 0.912
MTREX
Mtr4 exosome RNA helicase.
   
 0.868
EXOSC10
Exosome component 10.
   
 0.773
PUM3
Pumilio RNA binding family member 3.
   
   0.705
RPL8
Ribosomal protein L8.
    
   0.663
ZCCHC14
Zinc finger CCHC-type containing 14.
   
 0.646
EXOSC5
Exosome component 5.
   
 0.607
ZCCHC8
Zinc finger CCHC-type containing 8.
     
 0.577
ZC3HAV1
Zinc finger CCCH-type containing, antiviral 1.
    
  0.551
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.