Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAD2Adenosine deaminase domain containing 2. (478 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
   
 
 0.587
CFAP44
Uncharacterized protein.
      
 0.561
ADAT2
Adenosine deaminase tRNA specific 2.
      
 0.554
ADAT3
Adenosine deaminase tRNA specific 3.
      
 0.548
METTL5
Methyltransferase like 5.
      
 0.529
CBY3
Uncharacterized protein.
      
 0.515
POLR3F
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
      
 0.515
VIRMA
Vir like m6A methyltransferase associated.
    
 
 0.512
CRYBB2
Crystallin beta B2; Belongs to the beta/gamma-crystallin family.
      
 0.502
METTL3
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
 
 0.498
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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