STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PITPNC1Phosphatidylinositol transfer protein cytoplasmic 1. (323 aa)    
Predicted Functional Partners:
PITPNM3
PITPNM family member 3.
 
    
 0.860
PDE4B
Phosphodiesterase.
   
  
 0.741
AGTRAP
Angiotensin II receptor associated protein.
    
 
 0.739
HELZ
Helicase with zinc finger.
     
 0.613
CATSPER2
Cation channel sperm associated 2.
      
 0.576
PTPRE
Receptor-type tyrosine-protein phosphatase.
      
 0.557
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
      
 0.540
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 
 0.503
SALL3
Spalt like transcription factor 3.
      
 0.502
ARFGEF3
ARFGEF family member 3.
   
  
 0.500
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.