STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP7Charged multivesicular body protein 7. (450 aa)    
Predicted Functional Partners:
CHMP6
Charged multivesicular body protein 6.
    
0.989
CHMP4C
Charged multivesicular body protein 4C.
    
0.982
CHMP4B
Charged multivesicular body protein 4B.
    
0.982
CHMP2A
Charged multivesicular body protein 2A.
    
 0.947
VPS25
Vacuolar protein sorting 25 homolog.
    
 0.927
VPS28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 
 0.867
MVB12B
Multivesicular body subunit 12B.
     
 0.849
CHMP5
Charged multivesicular body protein 5.
    
 0.847
VTA1
Vesicle trafficking 1.
    
 0.845
VPS36
Vacuolar protein sorting 36 homolog.
    
 0.845
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.