STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP7Charged multivesicular body protein 7. (450 aa)    
Predicted Functional Partners:
CHMP2A
Charged multivesicular body protein 2A.
    
 0.979
CHMP6
Charged multivesicular body protein 6.
   
0.978
CHMP4C
Charged multivesicular body protein 4C.
    
0.977
CHMP4B
Charged multivesicular body protein 4B.
    
0.977
CHMP2B
Charged multivesicular body protein 2B.
     
 0.962
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.947
CHMP5
Charged multivesicular body protein 5.
    
 0.945
CHMP4A
Charged multivesicular body protein 4A.
    
 0.942
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.941
LOC100655308
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.920
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.