STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYTL4Synaptotagmin like 4. (672 aa)    
Predicted Functional Partners:
RAB27A
RAB27A, member RAS oncogene family.
   
 0.882
RAB27B
RAB27B, member RAS oncogene family.
   
 0.882
STXBP1
Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.859
STXBP2
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.745
RAB8B
RAB8B, member RAS oncogene family.
    
 
 0.719
RAB8A
RAB8A, member RAS oncogene family.
    
 
 0.719
RAB3C
RAB3C, member RAS oncogene family.
   
 0.690
RAB3A
RAB3A, member RAS oncogene family.
   
 0.690
RAB3B
RAB3B, member RAS oncogene family.
   
 0.690
STX3
Syntaxin 3; Belongs to the syntaxin family.
    
 0.653
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.