STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FREM2Uncharacterized protein. (1683 aa)    
Predicted Functional Partners:
G3U872_LOXAF
Uncharacterized protein.
 
 
 0.940
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
   
 0.913
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.912
NPNT
Nephronectin.
     
 0.815
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.659
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
   
 0.659
FREM1
FRAS1 related extracellular matrix 1.
  
 
0.635
G3T083_LOXAF
Uncharacterized protein.
   
0.590
GRIP1
Glutamate receptor interacting protein 1.
    
 0.545
RANBP2
RAN binding protein 2.
   
 
 0.480
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.