Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MKXMohawk homeobox. (352 aa)    
Predicted Functional Partners:
TNMD
Tenomodulin.
      
 0.737
IRX1
Iroquois homeobox 1.
    
 
 0.723
IRX6
Iroquois homeobox 6.
    
 
 0.722
DSCC1
DNA replication and sister chromatid cohesion 1.
      
 0.609
IRX4
Iroquois homeobox 4.
    
 
 0.602
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.568
IRF6
Interferon regulatory factor 6.
    
 
 0.563
HOXC4
Homeobox C4.
   
 0.557
HOXD10
Homeobox D10.
    
 
 0.554
MEOX2
Mesenchyme homeobox 2.
   
 0.553
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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