STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM13AUncharacterized protein. (180 aa)    
Predicted Functional Partners:
MYPN
Myopalladin.
     
 0.679
HERC3
HECT domain-containing protein.
      
 0.572
HERC5
HECT and RLD domain containing E3 ubiquitin protein ligase 5.
      
 0.564
SIRT1
Sirtuin 1.
      
 0.536
IREB2
Iron responsive element binding protein 2; Belongs to the aconitase/IPM isomerase family.
      
 0.516
HHIP
Hedgehog interacting protein.
    
 
 0.471
SPX
Spexin hormone.
      
 0.467
HERC4
HECT and RLD domain containing E3 ubiquitin protein ligase 4.
      
 0.466
PYURF
PIGY upstream reading frame.
      
 0.449
FAM43B
Family with sequence similarity 43 member B.
      
 0.445
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.