STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAPERS-phase cyclin A associated protein in the ER. (1403 aa)    
Predicted Functional Partners:
CCNA2
Cyclin A2; Belongs to the cyclin family.
    
 
 0.592
RCN2
Reticulocalbin 2.
      
 0.580
IARS2
Isoleucyl-tRNA synthetase 2, mitochondrial.
      
 0.575
CCNA1
Cyclin A1; Belongs to the cyclin family.
    
 
 0.557
G3SZ48_LOXAF
Uncharacterized protein.
      
 0.526
TSPAN3
Tetraspanin.
      
 0.520
TRIM44
Tripartite motif containing 44.
      
 0.517
IARS1
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.448
OPA1
OPA1 mitochondrial dynamin like GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
      
 0.444
DNMBP
Dynamin binding protein.
      
 0.444
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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