Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC9Kelch domain containing 9. (349 aa)    
Predicted Functional Partners:
CCDC190
Coiled-coil domain containing 190.
      
 0.720
SLAMF8
SLAM family member 8.
      
 0.620
ARHGAP30
Rho GTPase activating protein 30.
      
 0.578
ELOC
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 0.570
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.530
ELOB
Elongin B.
    
 0.510
YIPF2
Protein YIPF.
      
 0.500
FGD1
FYVE, RhoGEF and PH domain containing 1.
      
 0.500
SCAMP3
Secretory carrier-associated membrane protein.
      
 0.476
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.459
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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