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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIT1Nitrilase 1. (328 aa)    
Predicted Functional Partners:
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
 
 
 0.589
QPRT
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
  
 
 0.570
RPL31
Uncharacterized protein.
 
      0.551
SMS
Spermine synthase.
  
 
 0.540
POLA2
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
      
 0.532
C3orf38
Chromosome 3 open reading frame 38.
      
 0.524
NUDT15
Nudix hydrolase 15; Belongs to the Nudix hydrolase family.
    
 0.522
TDP2
Tyrosyl-DNA phosphodiesterase 2.
      
 0.514
OPLAH
5-oxoprolinase, ATP-hydrolysing.
    
 0.504
BCAT2
Branched chain amino acid transaminase 2.
  
 0.481
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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