Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC9Thioredoxin domain containing 9. (226 aa)    
Predicted Functional Partners:
CCT3
T-complex protein 1 subunit gamma.
   
 0.934
FBXW4
F-box and WD repeat domain containing 4.
    
   0.927
CCT5
Chaperonin containing TCP1 subunit 5.
   
 0.846
CCT7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 0.833
MRPL30
Ribosomal_L30 domain-containing protein.
   
  
 0.825
WDR86
WD_REPEATS_REGION domain-containing protein.
    
   0.804
KLHDC8A
Kelch domain containing 8A.
    
   0.801
CCT2
Uncharacterized protein.
   
 0.795
G3UKW5_LOXAF
Uncharacterized protein.
   
 0.795
PEX7
Peroxisomal biogenesis factor 7.
    
   0.793
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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