STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IFT88Intraflagellar transport 88. (830 aa)    
Predicted Functional Partners:
IFT57
Intraflagellar transport 57.
   
 0.998
IFT81
Intraflagellar transport 81.
   
 0.997
IFT80
Intraflagellar transport 80.
   
 0.997
TTC26
Tetratricopeptide repeat domain 26.
  
 0.996
IFT172
Intraflagellar transport 172.
   
 0.996
IFT52
Intraflagellar transport 52.
  
 0.995
IFT46
Intraflagellar transport 46.
   
 0.995
IFT22
Intraflagellar transport 22.
    
 0.993
IFT27
Intraflagellar transport 27.
   
 0.992
IFT74
Intraflagellar transport 74.
   
 0.992
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.