STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA6DSemaphorin 6D; Belongs to the semaphorin family. (1071 aa)    
Predicted Functional Partners:
SEMA6C
Semaphorin 6C; Belongs to the semaphorin family.
     
  0.870
SEMA6A
Semaphorin 6A; Belongs to the semaphorin family.
     
  0.867
TMEM38B
Transmembrane protein 38B.
      
 0.794
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.647
GOLIM4
Golgi integral membrane protein 4.
   
  
 0.621
NTNG1
Netrin G1.
    
 
 0.613
PLXNA2
Plexin A2.
    
0.577
PLXND1
Plexin D1.
    
 0.567
EPHB1
Uncharacterized protein.
   
 0.559
TREM2
Triggering receptor expressed on myeloid cells 2.
     
 0.555
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.