STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC4CLeucine rich repeat containing 4C. (640 aa)    
Predicted Functional Partners:
NTNG1
Netrin G1.
   
 0.919
NTNG2
Netrin G2.
   
 0.809
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.656
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.656
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.602
STMN2
Stathmin 2.
   
 0.591
ERC2
Uncharacterized protein.
   
 
 0.562
METTL4
Methyltransferase like 4; Belongs to the MT-A70-like family.
      
 0.555
TFEC
BHLH domain-containing protein.
      
 0.553
SEMA3D
Semaphorin 3D; Belongs to the semaphorin family.
      
 0.549
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.