STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAN2C1Mannosidase alpha class 2C member 1. (1002 aa)    
Predicted Functional Partners:
MAN2B1-2
Alpha-mannosidase.
     
 0.930
G3U8F0_LOXAF
Glyco_hydro38C2 domain-containing protein.
     
 0.912
MAN2B1
Alpha-mann_mid domain-containing protein.
     
 0.903
XRN1
5'-3' exoribonuclease 1.
    
   0.806
ENGASE
Endo-beta-N-acetylglucosaminidase.
  
  
 0.748
EOGT
EGF domain specific O-linked N-acetylglucosamine transferase.
      
 0.737
GLYCTK
Glycerate kinase.
     
  0.705
TVP23A
Golgi apparatus membrane protein TVP23 homolog.
      
 0.685
EDEM1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.679
CTBS
Chitobiase; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.671
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.