STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP5Secretory carrier-associated membrane protein. (238 aa)    
Predicted Functional Partners:
DNM3
Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.777
DENND1A
Uncharacterized protein.
      
 0.773
CLK3
CDC like kinase 3.
      
 0.661
SYT11
Synaptotagmin 11.
   
  
 0.598
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
      
 0.593
SCAMP3
Secretory carrier-associated membrane protein.
   
   0.585
APBA2
Amyloid beta precursor protein binding family A member 2.
      
 0.535
ADPGK
ADP dependent glucokinase.
      
 0.496
ZNF628
Zinc finger protein 628.
     
 0.495
RUBCN
Rubicon autophagy regulator.
      
 0.473
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.