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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16orf70Chromosome 16 open reading frame 70. (422 aa)    
Predicted Functional Partners:
BCAS3
BCAS3 microtubule associated cell migration factor.
   
 
 0.845
RAD21L1
RAD21 cohesin complex component like 1.
 
      0.756
PRIM1
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
 
      0.575
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
      
 0.573
KIF17
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.528
LIN7A
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
      
 0.528
G3SWC6_LOXAF
Uncharacterized protein.
 
      0.514
ZFYVE1
Zinc finger FYVE-type containing 1.
   
  
 0.511
RAD21
RAD21 cohesin complex component.
 
      0.473
MRPL48
Mitochondrial ribosomal protein L48.
      
 0.447
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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