STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PACSIN1Protein kinase C and casein kinase substrate in neurons 1. (444 aa)    
Predicted Functional Partners:
PACSIN3
Protein kinase C and casein kinase substrate in neurons 3.
    
  0.984
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
    
  0.951
COBL
Uncharacterized protein.
    
 
 0.945
HTT
Huntingtin.
    
 0.827
RAI14
Retinoic acid induced 14.
   
 
 0.819
WASL
WASP like actin nucleation promoting factor.
    
 
 0.757
TRIOBP
PH domain-containing protein.
    
   0.734
AMPH
Amphiphysin.
   
  
 0.661
MAPT
Microtubule-associated protein.
    
 
 0.617
CABCOCO1
Uncharacterized protein.
      
 0.608
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.