STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACSIN1Protein kinase C and casein kinase substrate in neurons 1. (444 aa)    
Predicted Functional Partners:
PACSIN3
Protein kinase C and casein kinase substrate in neurons 3.
  
 
0.833
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
  
 
 
0.818
WASL
WASP like actin nucleation promoting factor.
    
 
 0.688
COBL
Uncharacterized protein.
    
 
 0.631
SYNJ1
Synaptojanin 1.
    
 
 0.608
HTT
Huntingtin.
    
 
 0.597
SYNJ2
Synaptojanin 2.
    
 
 0.538
WAS
WASP actin nucleation promoting factor.
    
 
 0.495
CLIP3
CAP-Gly domain containing linker protein 3.
      
 0.457
SPDEF
SAM pointed domain containing ETS transcription factor.
      
 0.449
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.