STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRLSarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (878 aa)    
Predicted Functional Partners:
MYOM1
Myomesin 1.
   
  
 0.928
RYR1
Ryanodine receptor 1.
   
  
 0.903
UNC45B
Unc-45 myosin chaperone B.
   
  
 0.885
MYOM2
Myomesin 2.
   
  
 0.880
SMYD1
SET and MYND domain containing 1.
   
 
 0.870
KLHL41
Kelch like family member 41.
   
 
 0.788
SYNPO2L
Synaptopodin 2 like.
   
   0.788
MYBPC2
Myosin binding protein C, fast type.
   
 
 0.779
RBSN
Rabenosyn, RAB effector.
    
 0.736
WDFY4
Uncharacterized protein.
     
 0.664
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.