STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF7PHD finger protein 7. (382 aa)    
Predicted Functional Partners:
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.636
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.613
EED
Embryonic ectoderm development.
   
 0.579
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.546
ATF7IP
Activating transcription factor 7 interacting protein.
   
 0.527
MPHOSPH8
Chromo domain-containing protein.
    
 0.502
G3U976_LOXAF
ANK_REP_REGION domain-containing protein.
    
 0.502
KDM6A
Lysine demethylase 6A.
   
 0.498
EP300
E1A binding protein p300.
   
 0.493
CREBBP
CREB binding protein.
   
 0.493
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.