STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR153G protein-coupled receptor 153. (623 aa)    
Predicted Functional Partners:
BEST2
Bestrophin; Forms calcium-sensitive chloride channels. Permeable to bicarbonate; Belongs to the bestrophin family.
   
  
 0.574
DDX51
DEAD-box helicase 51; Belongs to the DEAD box helicase family.
   
 0.572
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.556
FAM162B
Family with sequence similarity 162 member B.
    
 
 0.540
USP5
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.536
CLCN4
Chloride channel protein.
    
 
 0.529
USP32
Uncharacterized protein; Belongs to the peptidase C19 family.
   
 
 0.523
CLCN3
Chloride channel protein.
    
 
 0.519
CLCN5
Chloride channel protein.
    
 
 0.517
TMEM167A
Protein kish; Involved in the early part of the secretory pathway.
      
 0.514
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.