Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BBXBBX high mobility group box domain containing. (854 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
    
   0.764
G3TS51_LOXAF
G-patch domain-containing protein.
    
   0.665
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.637
ATXN1
Ataxin 1.
    
 
 0.636
ATXN1L
Ataxin 1 like.
    
 
 0.636
LAP3
Leucine aminopeptidase 3.
      
 0.599
RPL22
Uncharacterized protein.
    
   0.564
IL17RD
Interleukin 17 receptor D.
      
 0.552
ACSL1
Acyl-CoA synthetase long chain family member 1.
      
 0.542
ZMYM3
Zinc finger MYM-type containing 3.
   
 
 0.530
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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