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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP89Centrosomal protein 89. (662 aa)    
Predicted Functional Partners:
CEP83
Centrosomal protein 83.
     
 0.820
SCLT1
Sodium channel and clathrin linker 1.
     
 0.818
G3UH79_LOXAF
Uncharacterized protein.
     
 0.729
CEP128
Centrosomal protein 128.
      
 0.654
CEP164
Centrosomal protein 164.
     
 0.631
CEP104
Centrosomal protein 104.
      
 0.594
CEP350
Centrosomal protein 350.
      
 0.589
ATRIP
ATR interacting protein.
   
    0.567
CEP76
Centrosomal protein 76.
     
 0.565
PIGL
Phosphatidylinositol glycan anchor biosynthesis class L.
   
    0.564
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.